Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGNGRFIKKVENSIELLQLNDNPKA
1VGG Chain:A ((18-35))
-LGQAHFIKTVEDLHEALVTAVPGIR
General information:
TITO was launched using:
RESULT:
Template:
1VGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3769 for 61 contacts (61.8/contact) +
2D Compatibility (PS) -1611 + (NN) 2430 + (LL) 208
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 3196.0 ( 52.39 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1VGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VGG-query.scw
PDB file :
Tito_Scwrl_1VGG.pdb
: