Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLK-DVIATATYAVVFSAIILTVAGVLLAKPLLILLRTPANILDDSTI-FLTTLFIGILPMSLYNGMAAILRALGNSITPLIFLILSSLMNIALDFLFVV----YMDMGVRGAAIATVLSQTAAAIAVIYY--AYRHVPFMRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSL-INGFGSSVVAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGI--TILVQLFARQFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFELVSRLVIGFVLSLYIGYVGLWWATPVAWITATILGVWRYKSGAWQKKAVIRRK |
| 3MKU Chain:A ((18-385)) | -----------------ATPVLIASVAQTGMGFVDTIMAGGVSAID-MAAVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPII---AVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVA-AALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL--GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ--VVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKD---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281806 for 3021 contacts (-93.3/contact) +
2D Compatibility (PS) -35354 + (NN) 8958 + (LL) 8472
1D Compatibility (HY) -34800 + (ID) 3950
Total energy: -338480.0 ( -112.04 by residue)
QMean score : 0.190
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