Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLTTNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMNHLL
4XPB Chain:A ((162-223))
----NRSEGIHDLGAIKWD----MALCLLIVYLICYFSLWKGISTSGKVV-WFTALFPYAVLLILLIRGLT---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4XPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22868 for 265 contacts (-86.3/contact) +
2D Compatibility (PS) -6630 + (NN) -4184 + (LL) 4312
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -38770.0 ( -146.30 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_4XPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XPB-query.scw
PDB file :
Tito_Scwrl_4XPB.pdb
: