Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTTVVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTKVVAINEIQDARIAKKLQIPPENMIVHFQRIRLIDDLPWTVQNNYMAKSNLINVDLTNFEKFNSLSEVIKELYGINILHEAMKERIEVEFPVKDKNNFKLLEIDTELPLYHIERITYVPEGQPYEYIESYLRHNFYSIEIEKKKQ |
| 3F8M Chain:A ((15-214)) | ----KHQVVRAELDRML-DG-MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVER-RGRTTVVARPKIRQPLGMGSYTEAAKAQGLSAGRILVAWSDLTA-----DEVLAGVLGVDVGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLR----ETFDHEASLYAEIRSRGIAFTRTVDTIDTALP--DAREAALLGADARTPMFLLNRVSY---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45798 for 1327 contacts (-34.5/contact) +
2D Compatibility (PS) -20822 + (NN) -384 + (LL) 3508
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -75996.0 ( -57.27 by residue)
QMean score : 0.401
|
|
|