Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITIIAAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKSYGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAALVSITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMSIPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGAISGPVLLTSLQQNIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIPSIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPPVLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV |
2B6O Chain:A ((201-225)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HWVYWVGPVIGAGLGSLLYDFLLFP----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11460 for 101 contacts (-113.5/contact) +
2D Compatibility (PS) -2418 + (NN) 522 + (LL) 34436
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 19330.0 ( 191.39 by residue)
QMean score : 0.174
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