Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQ-------YVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEK--IIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGVKAREIL--LGGGNIHCITQQVPR |
| 4YTG Chain:A ((47-316)) | -----------------------------------------------------------ITIVASESQKNTVITQYTQSGVNLSN-CDFIIAKTDSYWTRDYTGWFAMYDTNKVGLVDFIYNR----------PRPNDDEFPKYEAQYLGIEMFGM-KLKQTGGNYMTDGYGSAVQSH---IAYTENSSLSQAQVNQKMKDYLGITHHDVVQDPNGEYIN----HVDCWGKYLAPNKILIRKVPDN-HPQHQALEDMAAYFAAQTCAWGTKYEVYR------ALATNEQ---------------------PYTNSLILNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHARTHEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81305 for 1971 contacts (-41.3/contact) +
2D Compatibility (PS) -27719 + (NN) -9587 + (LL) 5100
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -127911.0 ( -64.90 by residue)
QMean score : 0.412
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