Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVRKTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGDQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTT----AVTAD-FIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLD-FETD-DEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEE--AIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 3ZIA Chain:G ((75-276)) | ---------------------------------------------------------------------------VAITSDKGLCGSIHSQLAKAVRR---HLNDQPNADIVTIGDKIKMQLLRTHPN---NIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIF-------NAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVI--TNELVDIITGASS------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97245 for 1324 contacts (-73.4/contact) +
2D Compatibility (PS) -20713 + (NN) -7135 + (LL) 8232
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -129461.0 ( -97.78 by residue)
QMean score : 0.364
|
|
|