Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQN-EANIMAQFASA----DAEQAERIFERLNKRKQTESRRSNDK
3ZIA Chain:H ((11-115))
-KLQFALPHETLYS--VTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSS-------
General information:
TITO was launched using:
RESULT:
Template:
3ZIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70134 for 582 contacts (-120.5/contact) +
2D Compatibility (PS) -10485 + (NN) -1920 + (LL) 192
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -87147.0 ( -149.74 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIA-query.scw
PDB file :
Tito_Scwrl_3ZIA.pdb
: