Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 1V54 Chain:I ((34-59)) | -------------------------------ATFYKFAVAEKRKKAYADFYRNYDSMKD------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3535 for 96 contacts (36.8/contact) +
2D Compatibility (PS) -2644 + (NN) -197 + (LL) 16780
1D Compatibility (HY) 1600 + (ID) 100
Total energy: 18974.0 ( 197.65 by residue)
QMean score : -0.039
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