Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
| 3DL8 Chain:E ((60-72)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALFLVLALLLSVI----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3897 for 41 contacts (-95.0/contact) +
2D Compatibility (PS) -1310 + (NN) 183 + (LL) 20652
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 13928.0 ( 339.71 by residue)
QMean score : -0.124
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