Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPI-VKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLL-LSKKPITISSHENLLDQVDSFQTGNGLLTR
3LA3 Chain:A ((59-232))
----------------------------------DPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRF--YHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADG-ITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3LA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104265 for 1193 contacts (-87.4/contact) +
2D Compatibility (PS) -18127 + (NN) -4256 + (LL) 3052
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -138796.0 ( -116.34 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_3LA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA3-query.scw
PDB file :
Tito_Scwrl_3LA3.pdb
: