Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLLRNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQDVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK
2LFW Chain:A ((82-143))
------------------------------------------------------------------------GTEAVARARLARMTPLSRQALLLTAMEGFSPEDAAYLIEVDTSEVETLVTEALAEIEKQTRA----
General information:
TITO was launched using:
RESULT:
Template:
2LFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23337 for 382 contacts (-61.1/contact) +
2D Compatibility (PS) -6588 + (NN) -3173 + (LL) 6676
1D Compatibility (HY) 1600 + (ID) 400
Total energy: -25222.0 ( -66.03 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2LFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LFW-query.scw
PDB file :
Tito_Scwrl_2LFW.pdb
: