Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIFQLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
| 3WU2 Chain:I ((8-30)) | --------ITVYIVVTFFVLLFVFG---FLSGDPAR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7870 for 81 contacts (-97.2/contact) +
2D Compatibility (PS) -2451 + (NN) -1520 + (LL) 23236
1D Compatibility (HY) -4400 + (ID) 100
Total energy: 6895.0 ( 85.12 by residue)
QMean score : -0.145
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