Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAKSQQAEAQLQLLKKEQSAAKDFLQDLQRQQ----NEQEWLAEDVARVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANEEECQQKITACRKNIYQLENQQQDLQKELLQ
4C47 Chain:A ((14-68))
MKEQQKEQETKINLLEKQQKEQEAKINLLEKQQATIINTTKKVTEVVGRVERKQR-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4C47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8138 for 184 contacts (44.2/contact) +
2D Compatibility (PS) -6072 + (NN) -7306 + (LL) 6508
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -2282.0 ( -12.40 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_4C47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C47-query.scw
PDB file :
Tito_Scwrl_4C47.pdb
: