Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPDWDFNNPESMKAWDLASGSYAEQVSG
2NUD Chain:C ((11-19))-GDWDENNPS------------------


General information:
TITO was launched using:
RESULT:

Template: 2NUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 480 for 19 contacts (25.3/contact) +
2D Compatibility (PS) -1085 + (NN) -3009 + (LL) 1220
1D Compatibility (HY) 0 + (ID) 300
Total energy: -2694.0 ( -141.79 by residue)
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_2NUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NUD-query.scw
PDB file : Tito_Scwrl_2NUD.pdb: