Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFSIISGVIFYYAGGGYKGKKIKIPKKWLDRRRNVNRIDFLQSVNIKDFVVKDKHLRNSTAKRARKFDAETSEEANLIVQDALKNGKVKKIEDNGLGSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTVYPVPAP |
| 2GHP Chain:A ((130-188)) | -----------------------------------------------------------------------------------------------QRNIR--DLLQDINVVALSIRLP-------RRFAYIDVTSKEDARYCVE------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1365 for 215 contacts (-6.3/contact) +
2D Compatibility (PS) -3936 + (NN) -110 + (LL) 9920
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -41.0 ( -0.19 by residue)
QMean score : 0.441
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