Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMET---WVPSVL----KSLDSKKLTVIDASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEG--AKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKL--EVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK |
| 4NNO Chain:A ((14-291)) | ---------------------------------KLKVVTTNSILYDMAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETGNGWFEKALEQAGKSLKDKK--VIAVSKDVKPIY--------LNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFIDNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFGEVYTDSIG---KEGTKGDSYYKMMKSNIETVHGSMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60840 for 2261 contacts (-26.9/contact) +
2D Compatibility (PS) -28979 + (NN) -11822 + (LL) 2864
1D Compatibility (HY) -19200 + (ID) 4700
Total energy: -122677.0 ( -54.26 by residue)
QMean score : 0.519
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