Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADGKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGD--APDAFELNYETFMQYAEKGVLADL--TSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFD------MFQDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSA----NEEAAKIRI----DNNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMGFK |
| 3K01 Chain:A ((30-408)) | --------------------------------VTFWDTSNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFK-NAAGGNSGAPDVMRTEVAWVADFASIGYLAPLDGTPALDDGSDHLP-----QAAASTRYEGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGATGLYLRGDDPYW---FLPYLYGEGGDLVDEKNKTVTVDDEAGVRAY-RVIKDLVDSKAAITDASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDAGNLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEKLSLLPTRTSVYEVPSVADNEMVKFF--------KPAVDKAVER----PWIAEGNALFEPIRLQMANVLSGETSPDEAAANTGDAYRKLL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26303 for 3148 contacts (-8.4/contact) +
2D Compatibility (PS) -38685 + (NN) -14569 + (LL) 2512
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -98395.0 ( -31.26 by residue)
QMean score : 0.409
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