Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVF--KLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVEL-PLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIA-SYGTRSIRIQDGKLFHEEATQA
4YMW Chain:J ((13-217))--------------------SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQ----KVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEE-----


General information:
TITO was launched using:
RESULT:

Template: 4YMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104475 for 1566 contacts (-66.7/contact) +
2D Compatibility (PS) -22152 + (NN) -11889 + (LL) 1764
1D Compatibility (HY) -24400 + (ID) 4450
Total energy: -165602.0 ( -105.75 by residue)
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_4YMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMW-query.scw
PDB file : Tito_Scwrl_4YMW.pdb: