Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
4AK1 Chain:A ((45-172))
------------------AITRITLDGEPFSDSIFAIDSETGKITLNSTSNTPVGLYK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4AK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17240 for 193 contacts (-89.3/contact) +
2D Compatibility (PS) -4199 + (NN) 103 + (LL) 4816
1D Compatibility (HY) -800 + (ID) 700
Total energy: -18020.0 ( -93.37 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_4AK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AK1-query.scw
PDB file :
Tito_Scwrl_4AK1.pdb
: