Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEV-----ISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
3E6C Chain:C ((23-223))
-----EKLRNYTQMGLIR--DFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGS-EKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDE---------DMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMP-LSQKSIGEITGVHHVT-VSRVLASLKRENILDKKKNKIIVYNLGELK----------------------
General information:
TITO was launched using:
RESULT:
Template:
3E6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94374 for 1288 contacts (-73.3/contact) +
2D Compatibility (PS) -20375 + (NN) -1952 + (LL) 2976
1D Compatibility (HY) -11600 + (ID) 2550
Total energy: -127875.0 ( -99.28 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3E6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6C-query.scw
PDB file :
Tito_Scwrl_3E6C.pdb
: