Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYKNYLQRTLVLLLCFILYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPL----AQTQTMSLYQQLEAGIRYIDIRAK---DNL-NIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDT-----SNKIPTLKDVRGKILLLSE-NHTKKPLVINSRKFGMQF------------GAPNQVIQDDYNGPSVK--TKFKEIVQTAYQASKADNKL--FLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN |
| 4I9J Chain:A ((5-282)) | -----------------------------------------SKSPENWMSKLDDGKHLTEINIPGSHDSGSF------TLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKV---TKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYYYASYINPEIAKTI--KANGKAR-TGWLIVDY---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4I9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85514 for 1878 contacts (-45.5/contact) +
2D Compatibility (PS) -25978 + (NN) -6744 + (LL) 3904
1D Compatibility (HY) -16000 + (ID) 4050
Total energy: -134382.0 ( -71.56 by residue)
QMean score : 0.527
|
|
|