Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVN-----HMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTY-----------LPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
1QM6 Chain:A ((8-163)) | -------------------------------------------------------------TGTHAMIVTQGVSILENDLSKNEPESVRKNL-EILKENMHELQLGSTYPDYDKNAYDL--YQDHFWDPDTDNNFSKDNSWYLAYSIPDTGESQIR--KFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANVTAVDSAG--HVKFETFAEERKEQYK--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32369 for 933 contacts (-34.7/contact) +
2D Compatibility (PS) -14950 + (NN) -6552 + (LL) 9168
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -54003.0 ( -57.88 by residue)
QMean score : 0.294
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