Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK |
3TZH Chain:A ((64-88)) | ----------------------------------------------------------------ALNVTNPESIEAVLKAITDEFGGVD---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 675 for 108 contacts (6.2/contact) +
2D Compatibility (PS) -2766 + (NN) -1626 + (LL) 8584
1D Compatibility (HY) -2400 + (ID) 550
Total energy: 1917.0 ( 17.75 by residue)
QMean score : 0.549
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