Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----VSERSMKRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDV-GFYIFQQVYPIYGIAMTLALGGF-PVVISKMLAEAEGDVRRQQIIMRAVSRMLRIV----SIVIFAFLFLFANLIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQGQQKELKRSVLLAIKITLILSGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKIAVPAVGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLGPKDFVFLPFGSKLLALSKLVARK |
| 3LDF Chain:A ((1-385)) | MIKLMVGSFAEKKLKRGVQLLSSRD-YPNLNLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSLNVTYFIKLFQWSKD--KRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQV--YPNFLGAYEKIR---FNVSAHLYGQEAPEQFLILENGISYNVFLN-------------DGLMTGIFLDQRQVRNELINGSAAGK---------------------------TVLNLFSYTAAFSVAAAMGG-------AMATTSVDLAKR-------------SRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPS----FARNKEVFSVSKDYHKLIRQGLEILSE--------------------------NGLIIASTNAANMT-----------------------------------------------------------VSQFKKQIEKGFGKQ-KHTYLDLQQL--PSDFAVNVQDESSNYLKVFTIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -378681 for 3024 contacts (-125.2/contact) +
2D Compatibility (PS) -38218 + (NN) 2689 + (LL) 14312
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -408398.0 ( -135.05 by residue)
QMean score : 0.219
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