Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGNKLQGKVTGITNFGAFVELE--GGKTGLVHISEVADNYVKDINDILTVGDEVTVKVMNIGD-DGKIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYVKPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG
1YZ6 Chain:A ((10-84))
---EEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRR-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1YZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48829 for 482 contacts (-101.3/contact) +
2D Compatibility (PS) -7585 + (NN) 1198 + (LL) 2836
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -61930.0 ( -128.49 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1YZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YZ6-query.scw
PDB file :
Tito_Scwrl_1YZ6.pdb
: