Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRIADILTTGFL-DGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDA---IQVEMYE-------GDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
3I8O Chain:A ((3-139)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------AKKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGRE----IGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVEL------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85987 for 943 contacts (-91.2/contact) +
2D Compatibility (PS) -14151 + (NN) -5023 + (LL) 18548
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -96763.0 ( -102.61 by residue)
QMean score : 0.479
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