Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVR-GVKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIF--GQGALRISSRELLFEIQEMSKQIGKKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE |
1KG8 Chain:A ((130-226)) | ---------------------------------------------------VYSYRFVWWAISTAAMLYILYVLFFG-----------VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRS------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13577 for 445 contacts (30.5/contact) +
2D Compatibility (PS) -8688 + (NN) -597 + (LL) 6844
1D Compatibility (HY) -9600 + (ID) 1050
Total energy: 486.0 ( 1.09 by residue)
QMean score : 0.259
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