Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHR--KEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL |
2H1Y Chain:A ((14-55)) | ---------------------------------------------------------------------------CIGMGKSFYEGHTLAKELFERASNALKVDMKKTLFEEN-ELLK---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4445 for 212 contacts (-21.0/contact) +
2D Compatibility (PS) -4249 + (NN) 746 + (LL) 7644
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -2804.0 ( -13.23 by residue)
QMean score : 0.218
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