Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKY-GLLKTFFSTFTEKCSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSKIAFKIYQEEVESVTEIINLIRTNIIADDVFLNNFSSFKTTNKLRLRYILKKINDSYSKEIAVLNDNNKIHLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 4LL2 Chain:A ((43-85)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPSFVRDGYKSLAKTIFGTYGIDCSF----DTEYNEAFIFYENFCAR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13936 for 224 contacts (-62.2/contact) +
2D Compatibility (PS) -4462 + (NN) 648 + (LL) 40688
1D Compatibility (HY) -5600 + (ID) 900
Total energy: 16438.0 ( 73.38 by residue)
QMean score : 0.165
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