Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLL-VEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKR--TGADKLILEEIA-AGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
2ABW Chain:A ((3-101)) | -------------------------EITIGVLSLQGD------FEPHI-NHFIKLQIPSLNIIQVRN------VHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNV---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ABW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36434 for 656 contacts (-55.5/contact) +
2D Compatibility (PS) -10140 + (NN) -4882 + (LL) 8532
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -49974.0 ( -76.18 by residue)
QMean score : 0.539
|
|
|