Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQN-KEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL |
1VFI Chain:A ((1-95)) | -----------------------------ISEFAPVDCKGQCTTPCEPLTACKEKCAESCETSADKKTCRRNCKKADCEPQDKVCDACRMKCHKACRAANCASECPKHEHKSDTCRACMKTNCK-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53742 for 577 contacts (93.1/contact) +
2D Compatibility (PS) -10031 + (NN) -4939 + (LL) 4492
1D Compatibility (HY) -800 + (ID) 650
Total energy: 41814.0 ( 72.47 by residue)
QMean score : 0.221
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