Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNAPIDVSAGPVVLSVPDT-SGRYYVLQFVDAWSNNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMI-EIKFPTNIGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGF-PE-YDRSLGKELAFFEQLRVYMAQFP--PAERDLVKQESFAPIGLMEKGV-SPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSA---ITALWGNHGYEAVYLMTWTDTDGNALNGKNK-YTLELNPIPPVDSFWSITMYDLPEYFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK |
| 3U07 Chain:A ((25-433)) | -----TNVDLAEDAYIYGYSIDEAYKFFYHT-A----VENNYPLNEFQ------------PTINNDTLHLMGWLDVAAEPVIVSVPDMDEGRYWILHTMDMGHYTNAAFSSRTRGTKGGQFMFAAQDWQGEVPASVDEVVRVDSNLVKLMGRIMAVNDEDAKVALNYMDQWNIRTLSEYLGKNGPKPVQRTYPDPKKSTWLERVNFVLCDGSMGNADKQWLDK--YQSIGVE-PCKTDF--TPE--QLKLAKVGEKKGMEHLVELAP--KMTDARTLLGTRDTLG-------D---------------APRDIFAEGTYLGQWGLPPIEASYRKSDFDSIGQKLDGSKHDYVMRFKA-PNVSEFWSVTIYGNDNRLMAKNDLNRHSRGDRT--MKADKDGYYTIYMSANEKGR-ADDPNFLPVPEKPFYAIMRFYGADDAIQSGEYQMPEIKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 71265 for 2765 contacts (25.8/contact) +
2D Compatibility (PS) -38140 + (NN) -6198 + (LL) 3376
1D Compatibility (HY) 20000 + (ID) 1450
Total energy: 48853.0 ( 17.67 by residue)
QMean score : 0.107
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