Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQ--DKKVLILYGGGSVERFGTLDKVKAALKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPAT--GSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTY---PVGALLQDRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGITSGSDEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL |
| 3JZD Chain:A ((17-326)) | ---------------VVFGAGSSSQVAAEVERLGAKRALVLC---TPNQQAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIA---LETGMP----------------------IVAIPTTYAGSEVTP--VYGLTEAGTKRTGRDPRVLPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEGLYARDANPVMSL----MAEEGIRALAAGIPAVFN-DPADLDARSQCLYGAW--LCGTVLGGVGMAL-HHKLCHTLGGSFNLPHAETHTIVLPHALAYNAA----AVPEAMARIRRAT-GAGEQSAAATLF---DLAQRHGAPVALRDIGMREEDLDRAAD----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205640 for 2787 contacts (-73.8/contact) +
2D Compatibility (PS) -32085 + (NN) -8968 + (LL) 3792
1D Compatibility (HY) -8000 + (ID) 4100
Total energy: -255001.0 ( -91.50 by residue)
QMean score : 0.455
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