Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNP---AQFITGSPSHQAFFASVAHFKQEVDK--TALLQIMFGEPVECLKQLKETLPSWDKVYFNRDETGYGAERDEAAKTFFDEQEIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKK-----WREEIKETPFKVTLKADNIRKENLFPKYEEQFAEMTCDLPILDS---GEKTANTRLANFIKHDVADYDKARDFPELDKTSHLSRYLRTGEISVRTIWQ---------ALQENEATEGRA-IFEKELCWRDFYNMIYVSFPNQKNEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKERRKLAIARYEFSKEHYRGNI |
| 1U3C Chain:A ((15-481)) | ---IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGA-SQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGD-VSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54418 for 3652 contacts (-14.9/contact) +
2D Compatibility (PS) -46543 + (NN) -12874 + (LL) 1796
1D Compatibility (HY) -28800 + (ID) 7100
Total energy: -147939.0 ( -40.51 by residue)
QMean score : 0.399
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