Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALY--RRGKTKHSICQEFNVPHSTFGKWIKKFNNEENIESNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
3V5Z Chain:A ((19-100))
-----------KQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVH--NKLS---EMLSLFEKGLKNVK
General information:
TITO was launched using:
RESULT:
Template:
3V5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2655 for 410 contacts (6.5/contact) +
2D Compatibility (PS) -7964 + (NN) -2377 + (LL) 1752
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -12384.0 ( -30.20 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_3V5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V5Z-query.scw
PDB file :
Tito_Scwrl_3V5Z.pdb
: