Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPLIKG-----EADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
| 1GEW Chain:A ((192-267)) | ------------------PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6228 for 335 contacts (18.6/contact) +
2D Compatibility (PS) -7283 + (NN) -372 + (LL) 20340
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: 15013.0 ( 44.81 by residue)
QMean score : 0.105
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