Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNWQQKWESWRDMTAAMQQEIKIEAAEKVTSYIKNDQFEEAINVIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLSHVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQYKNIGFICQNDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNPEVLFQ |
2D2S Chain:A ((538-582)) | ------------------------EGVEEIDIELARLRFESAVETLLDIESQLEDLS------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5919 for 162 contacts (-36.5/contact) +
2D Compatibility (PS) -3666 + (NN) -2672 + (LL) 13856
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -401.0 ( -2.48 by residue)
QMean score : 0.641
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