Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSV-PDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
3QQ6 Chain:A ((1-64))
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDE----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31718 for 446 contacts (-71.1/contact) +
2D Compatibility (PS) -6687 + (NN) -1699 + (LL) 10200
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -36354.0 ( -81.51 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_3QQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QQ6-query.scw
PDB file :
Tito_Scwrl_3QQ6.pdb
: