Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNLQKGFPENFKWGSSTNAQQFEGGYKEGGKGLSIAD-VRVIPDMPDESDFESFKTASDHYHHYKEDIAYYGEMGFQIYRFTMAWSRIFPNGDETEPNDAGVEFYSNMLAELEKYNIEPVVTLYAYDMPLQLLEKYNGWLDRAIIKDYLHYVETVVKLFKGRVKYWVPFNEQNFISIDSEYMSGYRA---KNKAEVFQIQHHFNLCYAEATKLVHQIDP-DAKVGGNIGNICPYPMTCKPEDVEASDKVAQQLGYAYGDIYFRGYYPKYFLKEYEGVDFEQIILDDDLTIIKSSEPDFMSLTYYMSSAIEAKGEEEVVVMNGIKAPNPYCETTEWGWTIDPYGFKHYLQEFYHRY-QLPILILENGMGARDEKNTDDTIDDTYRIDYLASHIARMQEAVEEGCEIIGYLTWSATDLYSTREGFEKRYGFVYVDKDNSYKRLKKKSFYWYKKVIETNGNDLNY |
| 4HZ7 Chain:A ((3-441)) | -----KKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGD--SGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSR-QINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP-QWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEP-MVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYP--NLPEFIAPEDMQTI-SAPIDFLGVNYYNPMRVKSSPQPPGIEVVQVESP-----VTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTL-KQSAQWYRDVIANNG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196570 for 3776 contacts (-52.1/contact) +
2D Compatibility (PS) -45827 + (NN) -16545 + (LL) 1152
1D Compatibility (HY) -28000 + (ID) 6950
Total energy: -292740.0 ( -77.53 by residue)
QMean score : 0.529
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