Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVPFVGNVRDGHEFVGQAREMGAVATFWQKNVPNPPTDFPVI--LVEDTLLALQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYT-ILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEETLLLGNINGDFRQLTFGKSEAAEIYPLEIRAEAEGTSFIT---------NWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLENDTIQKVFLYGDAMKAFGEVAESKIGQGKVHHFDTKESLETALLSEIKGNEWILVKGSYGMGLKDVVENLIIK |
| 3LK7 Chain:A ((80-360)) | -------------------------------------------------------------------------PGIPYNNPMVKKALEKQIPVLTEVELAYLVS-ESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGN----IGFPASEVVQAANDKDTLVMELSSFQLMGV----KEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVL---------NFNQGISK-ELAKTTKATIVPFSTTEKVDG-AYVQDKQLFYKGENIMSVDDIGVP--GSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDNT------KVILIAGGLDRGN--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96269 for 2132 contacts (-45.2/contact) +
2D Compatibility (PS) -28334 + (NN) -8076 + (LL) 13276
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -140203.0 ( -65.76 by residue)
QMean score : 0.409
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