Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHISLTVFREDWL---ENLTLEATLRIHLKVDSGMGRLGIRTTEEAR-RIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQ--IGFDAI-RFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGKDHGNTITADDAAQYLDTINYEVTCLLNERIPRKYIH |
| 3CO8 Chain:A ((7-371)) | -----HRSTRIEFSKSSLAYNVQYTK-QVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAGI-DDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILGKEKLSVNLAVDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFA---------FQRQKNRWYELIDGLIM-PRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSEGVLGPID-KLKPVFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQDFQLLIDGQKCRQVGQIAMDQMMVALPHEYPIGTEVTLIGKSGKYENTLYDLHKHSGVPPWKITVAFSDRLKRMVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201204 for 2923 contacts (-68.8/contact) +
2D Compatibility (PS) -37669 + (NN) -8376 + (LL) 1388
1D Compatibility (HY) -31200 + (ID) 6050
Total energy: -283111.0 ( -96.86 by residue)
QMean score : 0.515
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