Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGH----PVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3H4O Chain:A ((29-181))
----------RYSCRNYQDRKVEKEKLEKVLDVARIAPTGGNRQPQRLIVIQEKEGINKLSKAA-----NIYDAPLAILVCG--------DKDKVWTRPFDGKQ---LTDIDTSIVTDHMMLQATELGLASVWVCYFNPDI--IREEFSLPDNLEPINILLMGYESKIPESPERHEKTRVP---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H4O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101385 for 1111 contacts (-91.3/contact) +
2D Compatibility (PS) -16219 + (NN) -10017 + (LL) 6884
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -131887.0 ( -118.71 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3H4O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H4O-query.scw
PDB file :
Tito_Scwrl_3H4O.pdb
: