Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANE--------TISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 2HQS Chain:H ((17-86)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRSDFAQMLDAHANFLRSNP-----SYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYG--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30271 for 369 contacts (-82.0/contact) +
2D Compatibility (PS) -6675 + (NN) -5451 + (LL) 25916
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -19031.0 ( -51.57 by residue)
QMean score : 0.606
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