Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKIFAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKDQYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRSFNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAGLKKGDEVLSINGKETKSWTDIVQNVSENP-GKTLDFKIERDGKTQDIDVKPATQKENGKDVGKI--GVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYTSTQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKEGIIHFAGFALLMVLMILVTWNDIQRAFF |
| 3CS0 Chain:A ((293-372)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIE---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357 for 418 contacts (-0.9/contact) +
2D Compatibility (PS) -8087 + (NN) 54 + (LL) 25036
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: 10446.0 ( 24.99 by residue)
QMean score : 0.612
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