Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSS--PGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF |
4YV1 Chain:A ((18-87)) | -----------------------------------------------------------------------GWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFES-DPKGPW-GTVMALDG---CIQVTD----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5545 for 317 contacts (17.5/contact) +
2D Compatibility (PS) -6071 + (NN) -1284 + (LL) 8352
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 1942.0 ( 6.13 by residue)
QMean score : 0.243
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