Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTYIFAVSQTPIIKRVFQYHGSEHKVINCYE-ENLPL------TVENVQK--------QSRLHYRCGSSFILFTVIVGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE |
| 1FMJ Chain:A ((21-82)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKLVKANLGAFPTTYVKLGPKGYMVYRPYLKDAANIYNMPLRPTDVFVASYQRSGTTMTQEL--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6594 for 179 contacts (-36.8/contact) +
2D Compatibility (PS) -4773 + (NN) 239 + (LL) 23092
1D Compatibility (HY) 2000 + (ID) 300
Total energy: 13664.0 ( 76.34 by residue)
QMean score : 0.236
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