Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKVVTDAGEEIPFEADGE
3U0C Chain:A ((114-171))
-----QKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPE------------
General information:
TITO was launched using:
RESULT:
Template:
3U0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7113 for 219 contacts (32.5/contact) +
2D Compatibility (PS) -6523 + (NN) -4193 + (LL) 996
1D Compatibility (HY) -800 + (ID) 350
Total energy: -3757.0 ( -17.16 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3U0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U0C-query.scw
PDB file :
Tito_Scwrl_3U0C.pdb
: