Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
3HHG Chain:A ((5-49))
-----------SEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLE--EKLGVNL--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15973 for 260 contacts (61.4/contact) +
2D Compatibility (PS) -4858 + (NN) -2368 + (LL) 6516
1D Compatibility (HY) -1600 + (ID) 900
Total energy: 12763.0 ( 49.09 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3HHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHG-query.scw
PDB file :
Tito_Scwrl_3HHG.pdb
: