Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLE-----------------------THVAQLKSLVKYAQA--GGKKVLLHADLVNGLKN-D-DYAIDFLCTEICPDGIISTR------GNAIMKAKQHKMLAIQRLFMIDSSA-CNKGVALIQKVQPDCIELL----PGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
2EKC Chain:A ((37-236))
-------------------FKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYNPIFRIGLEKFCRLSRE-KGIDGFIVPDLPPEEAEELKAVMKKYVLSFVP---LGAPTSTRKR-IKLICEAADEMTYFVSVTGYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIG-SFADGVVVGSA---
General information:
TITO was launched using:
RESULT:
Template:
2EKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102543 for 1083 contacts (-94.7/contact) +
2D Compatibility (PS) -16577 + (NN) -8400 + (LL) 1872
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -131898.0 ( -121.79 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2EKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EKC-query.scw
PDB file :
Tito_Scwrl_2EKC.pdb
: